Release Notes

v1.0.1

• ORILINX takes a fasta file of mammalian DNA as input and produces a csv or bed file indicating the probability that each locus can act as an origin of replication.

• Documentation is available at https://orilinx.readthedocs.io.

• Released with Pfuderer PL, Berkemeier F, Nassar J, Crisp A, Jaworski JJ, Moore J, Sale JE, Boemo MA. A genome language model for mapping DNA replication origins. bioRxiv 2026. [Read on bioRxiv].